rs241995964 SNP Detail

Summary

• ID
  rs241995964
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:7506922 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gagagagag aggggagaga gagagagaga
  gagagagaga gagagagaga ggagagagga gagagagaga gagaggagag aggagagaga
  gagagagaga gagagagaga gaggagagag gagagagaga gagagaggag agagagagag
  R
  ggggggagag aggagagaga TTAATGGGGA AAGTGTGTAT GAGAGAGGTG GAGAGCATGC
  ATAAAAACAC ACAGATACTG AGAGACAGAG ATATAGTGAT CATGAGAGAA aggggagggg
  agaggagaga aaacgaatag aggaaagagg                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325888090	CHEV_X_7217809	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241995964					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:7506922 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22570	CpG island 22570	1733 bp distal
Rr689618	regulatory region 689618	149 bp distal
Syp	synaptophysin	within coordinates
Tssr160397	transcription start site region 160397	1986 bp downstream
Tssr160398	transcription start site region 160398	410 bp upstream