rs242062253 SNP Detail

Summary

• ID
  rs242062253
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:3471225 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATCTGGCAC AGAAAGGGAA
  GAAGTAAGAT CTTACACTAC CTGAGAGAGC CTTAAAACAT TATTCCAGGC CAGGCCTCTG
  GAACCAGAGG CAGGTGGACC TCTGTGAGTT TGAGGCCAGC CTGATCTTCA GAACAGAAAA
  GGCTACCTAG AGAAACCCTG TCTTGAAAAA CCAAAAGAAA AAAGAAATTA TTCCAAGGAT
  R
  AGTCCAGTGG TGCAGACTTG TAATCTCAGC TCCTCAGATG GCTAAAATGA AGAGGATTCC
  ATGTTCAAGA CTCTTCTGGG CTTCAGAGTG AGCTCAAGGC CAACCTGTGC TACTTTAGCA
  AGGCTTCATT TCAAAATGAA AAATTAAGGG CTAGGGACTA TAACTCAGTG GTAGGGCACT
  TACCCAGTTC ATGCTCCATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320204622	CHEV_2_3387460	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242062253					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:3471225 () rs orientation: forward

Symbol	Name	Function Class
Gm13184	predicted gene 13184	within coordinates
Suv39h2	suppressor of variegation 3-9 2	within coordinates
Tssr15896	transcription start site region 15896	1575 bp downstream