rs242071425 SNP Detail

Summary

• ID
  rs242071425
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:3671601 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAACCTCC TTTCTTTGAG
  AGTGGTCCAA CAAACTGAAG TACGAAGAGA GGTGTGAGCT TTATGTCTGT ATTGTTGATA
  GAAGACTTCA TTTCTAATGC AGTGAGTCCA GCTCTTGTTA TTATCTTCTT AATAATCAAG
  ATAAAAAAAC AGTAAGCCCC CTGCCTCATG ATGTCCTGTT TGTACCCTCC TGAAGTGTTT
  Y
  TAATCAGTGT GACATATGTC AGCATAAGTG ACAGAAAACA GAAGTCGTTT ATCTGCGACC
  TGGAAAAAGT AGAAAATGAA TCCTAGCTTG GGGTGGGATT TGAATTGTTA CTGTTTAAGC
  TATGCTTCCC CCCAACCACC CCACATAATT TTCCTCTAGT GAAAAAAGGA AAAATAAATG
  TATCTAAGCA GCTAATTAAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320204868	CHEV_2_3587836	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242071425					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:3671601 () rs orientation: forward

Symbol	Name	Function Class
Gm50615	predicted gene, 50615	within coordinates
Rr372694	regulatory region 372694	within coordinates
Rr550927	regulatory region 550927	1472 bp distal