rs242109077 SNP Detail

Summary

• ID
  rs242109077
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:129954593 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tgagcatgg aagatctttc tatcttctgt
  gatcttctaa gatttctttc ttcagagact taaagttctc gtcatacaga tctttcactg
  gcttggttag aatcacacca atgtatttta tattacttgt gactattgtg aagagtgtca
  Y
  ttccctaatt tctttctcag aatgtttatc ctttgagtag aggaaggcta ctgatttgtt
  tgaattaatt ttatatccgt tcactttgct gaagttgttt attaggttta cataatggag
  tactattcag ctattaaaaa taatggtttc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323544179	CHEV_10_129555780	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242109077					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:129954593 () rs orientation: forward

Symbol	Name	Function Class
Gm5181	predicted gene 5181	1515 bp upstream
Rr385500	regulatory region 385500	571 bp downstream