rs242118826 SNP Detail

Summary

• ID
  rs242118826
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:120439259 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTCCTCAA GGGAATGATG
  CCCCTCTGAA CAGAGTTGAG GGCAGGCCAG GTGAGGATCC CCACACCTGC ACACAGTTGA
  TGCTCAGGCT GGAGGGATGC TTGCAGGCTA GCCCTCAAGA TGCTACTTTG TAACTGTAAT
  CTTGCTACTG TTATGACTCC TGTGAAAGAA TCATTTGACC TCCAAAGGGA TCATGACTTA
  Y
  AGACTGAGAA TTGCTCATGT GGGGGTGGTC ATCTGTAGCT TCCAGATTAG GGTAATTGAG
  GTAGTAAGAG GGGAGGCCAG AGTGACAGGT AGAGTCAGGT TTAGAAGGCT CCTGCTCTGG
  GCTTTTCCCA GATGGGCACT CAGCCATCCA ACAAGGCTGG ACATTAGAAC TACCAGCCTG
  TAACCCCCAG AGGACTCCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323229192	CHEV_9_120519310	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242118826					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:120439259 () rs orientation: forward

Symbol	Name	Function Class
Gm39456	predicted gene, 39456	1729 bp downstream