rs242123235 SNP Detail

Summary

• ID
  rs242123235
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119006974 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGTAGATCAC GTAGACCACG
  TAGATTACAT AATTGTAGAT TACGTGTCTC TCACGTGTAC TATCTCTACC CTTTGGAGCC
  TTCATTCTGC TTCCTGGTGG CCACCAGAGT TGTAAAAACA AAATGTGAGC CTGTCAAGAT
  ATTAAGTTCA CTCTTTCCCT CATATCCCCC TCTCAGCCTT GACTCGTCTC TCCTCGGACA
  Y
  AGCCAGCACA GGGCTGTTCC CACCTCCCTG TTCCTCTGAG CTTAGCTATG TGAGCTGAGC
  CTTCACAGTT CCCCACTCTG ACACGCCTGT CCTAGCACTC CCTACGTTTA GAAACAGCAT
  ATCACTCGAA CATGCCTCAG CTGACCACAA AAGGCCCTTT CTGTTCCCCT ACCCCACCCA
  CCCCAAGGGT CATTTCCTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323217937	CHEV_9_119087026	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242123235					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119006974 () rs orientation: forward

Symbol	Name	Function Class
Rr193313	regulatory region 193313	427 bp proximal
Rr211575	regulatory region 211575	1337 bp proximal
Slc22a14	solute carrier family 22 (organic cation transporter), member 14	within coordinates