rs242124051 SNP Detail

Summary

• ID
  rs242124051
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:104729917 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tcacaCCTT CCATCAAAGC CAGGGCCATA
  AAAGTTCTGG ATTTGATCCT CTCATAGACG TAAAACTCCA AAATTGAgga ctggagagat
  ggctcagcag ttactggctg aaccacttgc tcttcccaag ttcaagtccc agcactcaca
  W
  ggcagctcac aattgtctgt aactccagtt ccaggggatt ggataccgtc acatagacat
  gcatgcagac aaaataccaa tgcacataaa ataaaaacaa aTCATTGAAA AATGCTCCAA
  AAACAAACAA ACAAGCAAAA AAATCCTCCA                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323170383	CHEV_9_104755048	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242124051					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:104729917 () rs orientation: forward

Symbol	Name	Function Class
Cpne4	copine IV	within coordinates
Rr198572	regulatory region 198572	484 bp proximal
Tssr86829	transcription start site region 86829	1739 bp upstream