rs242135018 SNP Detail

Summary

• ID
  rs242135018
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97023618 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTCAGGTG AGTTCACTGG
  CCCCAAGGAT TGAGGCCAGG GGAGTTGCCA TGGGGAGAGA AGGGGAGGGA GAGAGGAAAG
  AGAAAGAGAG AAAGGGTGAG ATCTCAGAGA GAGAAGAAAA GGAGGAGGAG AGACCAAAAA
  ACGTCTGGAT TATATAGGGA GGAGCCTCTG GGGGAAGGGC AGCCCAGCCC CTGGGCTGGA
  R
  AAGTCAAGGT TGGAGACAGA GTATGATGTG TAGGGACTGA GGGGTGCTGG GAGAACCTGG
  AGGCCAGGTT TGCTTTGACA TGTAAAATGT GCACCTCAGT CCCTTGTTCT GGGTCCAGAA
  AGCAAACACT TTAATCATGG AGTCATTTGT GCTAAGATCT GGGGGCCTAC TTAGGTCTGG
  GGCCCTGTTC CACCTTCCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323116091	CHEV_9_97041984	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242135018					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97023618 () rs orientation: forward

Symbol	Name	Function Class
Gm57041	predicted gene, 57041	within coordinates
Rr685156	regulatory region 685156	604 bp distal
Tssr86631	transcription start site region 86631	426 bp downstream