rs242165733 SNP Detail

Summary

• ID
  rs242165733
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:33607332 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTTGTAGA GAACAAGTCA
  CTCAAAATGC TCACTAAGCA CACAACCCCA GCTCCTGGCC TTACCCTCTT GCATTCCTTA
  GTCCTGCACC CAAAATAAAC CCTTACAGCC TCTATCCACC TATTCTTCTG TCTTCACAAA
  TATTTACTGA GCAAGTCCTA CCTGCCAGCT GTTCTGAGGG ATGGAGACAG GGTGAACAGG
  R
  CAAGGACCAC AGTCAACTCA GCAGCCAACA AAGAGAAAAG GCTCCTGAAT AGAGTCCACT
  GGGTAGAGCT AATCCTTTAG ATAAGACCAT AAAGAAGAGG CCATATTCAG GCTAAGATAT
  CCCCATGACT TCTTATGGCT GCAGTTGGTT AAAGTTCACC CTGCCTGCCA GGACCTGGGA
  GGCCCTGCAG GGTCAGGCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325139899	CHEV_16_33787048	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242165733					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:33607332 () rs orientation: forward

Symbol	Name	Function Class
Gm15657	predicted gene 15657	within coordinates
Gm15658	predicted gene 15658	within coordinates
Rr326609	regulatory region 326609	within coordinates
Tssr140846	transcription start site region 140846	6 bp downstream
Tssr140847	transcription start site region 140847	142 bp downstream
Tssr140848	transcription start site region 140848	204 bp downstream