rs242167481 SNP Detail

Summary

• ID
  rs242167481
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185415223 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATAAGAATC AACACCAGCT TGGTTGTCCT CTGACCTTCC
  CTTTTGTGAT GGGCACACAT GTGCTCACAT TCACACGGGT GAATGAACAT GCATAGTCGT
  K
  CATACACACA CACACACACA CACACACACA CACGCACACG CACACGCACA TGCACACTCG
  CGCACACACA CACACACACA CACACACACG CACGCACGC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320178605	CHEV_1_187506905	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242167481					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185415223 () rs orientation: forward

Symbol	Name	Function Class
Rr425420	regulatory region 425420	466 bp distal
Rr425421	regulatory region 425421	918 bp distal
Rr425422	regulatory region 425422	1772 bp proximal
Rr425423	regulatory region 425423	1960 bp proximal