rs242231934 SNP Detail

Summary

• ID
  rs242231934
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:9164703 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTTTTGGA GAAATTCCTT
  GATCCTCTTG GCTTTGTACC TCTGGACCCC ATAATGTGGA CACTGAGCTT TACAAGCTGG
  TTTGCTAAGC AGTTAATGGA AGGTCTCCAG CCTCGCTCAT TTTCTCCAGT GCCATCCGGA
  GCAGCTCATC TGTCCACAGT GTTTCTCAGG GTGTAACACT CTGGTCTCTG GCCTGAGTAC
  R
  CCCCCCAAGC ATCCTCAGTC TTTCCATCGT GACATCCTCT TCCTAGGCCT CTGTAAGGGA
  CACTGTGTGT CATGTAAGCT CTGTCCCATG CCCCCTCCTT TAAAAAGCCC TTTTTAGCTG
  GGCATAGTCC ACACAACTTC AATCTTAGCA CTGTGGTGGA GTGAGGCGGA GGGATAGAAG
  GGGGTGGGAA AGGCAAGTGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320649748	CHEV_3_9099643	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242231934					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9164703 () rs orientation: forward

Symbol	Name	Function Class
Rr374480	regulatory region 374480	1276 bp upstream
Rr573385	regulatory region 573385	1155 bp proximal
Rr573386	regulatory region 573386	1608 bp proximal