rs242274738 SNP Detail

Summary

• ID
  rs242274738
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:102984663 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aagtgctcc taaccactga gtcatctctc
  cagcccTTCC GTTCaacatt taagaaacaa ttccaatttt acataagctc ctgccacaaa
  tgggtgatgc ccgtgtactt cctggctcat tttctgaggc cagcatgact gttatccaaa
  Y
  caaatgatga tattaATTTT TGTTGTTGGT TTTGTTTTGt ttttgctttt attggatatt
  ttctttattt acatttcaaa tgttatctcc tttcctggtt tcccctctga aaaacaccct
  cttccttatc ccctccccct gctcaccaac                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323160327	CHEV_9_103009794	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242274738					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:102984663 () rs orientation: forward

Symbol	Name	Function Class
Gm46128	predicted gene, 46128	within coordinates
Rr401633	regulatory region 401633	1078 bp upstream