rs242293272 SNP Detail

Summary

• ID
  rs242293272
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132184219 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTTTGGGG TTCTTTAAAA
  AACTTTTTTA GACAGTTTCT CACCTGGAAC TCTGTAGAGA AGGCTGGCCT CGAACGCACA
  GAAATCTGTC TGCTTGTCTC TTGATGCAAA ACCCCACTCC CACCTGGGTC TTGCTATATT
  GTCCAAACTG GATCTTAAGT TTCTGGACAC AAGTGTTCCT CAGACTTCAG CTTCTCTGGT
  W
  GTTGGGACAA ATGAGGACAA ACTATGCCTT GCTTGATAGT CTGTGTGTTT GTGTTTGAGT
  GGGATTAGTC AGGGAACTTG TACATGAGTG GTATTAGTTA TAGATCTTGT GCATGCTAGC
  CAAACAGTCT ATACTGGACT ACAATCCATT CCTCTGAATG ACAAACTAAG ATCCAAAGTG
  AGTTATGGCC AGGCTTGTTG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321333550	CHEV_4_132012823	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242293272					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132184219 () rs orientation: forward

Symbol	Name	Function Class
Med18	mediator complex subunit 18	1823 bp downstream
Rr377204	regulatory region 377204	639 bp upstream