rs242322313 SNP Detail

Summary

• ID
  rs242322313
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:70896652 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGTCTAGT AAAGTGGTGC
  ACTCACTGTT AGAAGTCACT CAGTTCATGT GGGCAACAGC AGAGGCAGGC TGTGCTGTGT
  GTCTCAGCCT TAGGATGATA TACCTGCTGA AGTGAGAGGT AAGGAATTTG GATAATTAAA
  TGACCTGATT AGCTGGATGG CATCATATGA GCCAAACTGT CTTTCAGGTA TTGCCTTCAT
  R
  GTCATCTATC TCTCTGCCTT GCCTTGGCAA CAGCATACTA CTATGTGGCT AGTCTTTGTA
  AGACTCTTGT GGATGAGAGA TAAGAGGTAG AAAAGAAATA AATGCCATTC TCTCTTGCTC
  TGTCAAGGAG TCAACTAATA AAACTAGCCT GCTCATTCTT GTGTTTCATT TATGCTGTGT
  GCAATCAAGC ACACTCATCG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324416634	CHEV_13_70887411	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242322313					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:70896652 () rs orientation: forward

Symbol	Name	Function Class
Adamts16	ADAM metallopeptidase with thrombospondin type 1 motif 16	within coordinates
Rr284828	regulatory region 284828	1509 bp distal
Tssr123156	transcription start site region 123156	1549 bp downstream