rs242342866 SNP Detail

Summary

• ID
  rs242342866
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:81103728 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAGCTGGCT TCCCGCCTGC
  GCCCCCTCGC GGGCTGCTCA ACTCCTCCTC CCCTCCGGGC CCGCGCCCCC CAGCCCCGCG
  AGGCTCCCGG GGACAGCCCT CGAAGCCCGG TCACACGCAC GTGCGACCTC ACCTGGCCCG
  GTCCACCCTC GGGGCTAGGG CTCCGGGAGC AATCGAACGT GTGAAGCCAC GTGACTTCCC
  S
  GGGCTTGGAA AGAGCGCGGC CCGCACGAGG GGCCCGAGAC CTCGGCTTTA AAGGAGCCAT
  GTCAGCGCCG TCGTGGCGCG TCTCCCCCTG CGCCGCCCCA GCCTGAGGGG GTCTCCGCGG
  CTCGCTGCTG CGCCGCCCGC AGCGAGCCGC CAGCCCCTGC CTCCTGCGGG ACGCCAAGGC
  GACTCTCGGG GAGAGAGAGA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322285121	CHEV_7_88598866	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242342866					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:81103728 () rs orientation: forward

Symbol	Name	Function Class
Cpeb1	cytoplasmic polyadenylation element binding protein 1	within coordinates
Cpeb1os1	cytoplasmic polyadenylation element binding protein 1, opposite strand 1	1915 bp upstream
Cpgi19352	CpG island 19352	within coordinates
Tssr73332	transcription start site region 73332	771 bp downstream
Tssr73333	transcription start site region 73333	1406 bp downstream
Tssr73334	transcription start site region 73334	1461 bp downstream
Tssr73335	transcription start site region 73335	1509 bp downstream