rs242366807 SNP Detail

Summary

• ID
  rs242366807
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:74317316 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGGCTGGAA GTCCTACCCG GAGGCTGTTC
  ACTGAAGTGT AACAGGCTCC ACGTGGAGAC AGGGTGGGGG TGCGGGAACA GAGCACTCTG
  TGACTTCCCA GACCTGGCCT TCGGGAGCCT CTCACCCAGT GGCTGGCCAG TTACTGTCCT
  Y
  TCTTGGCACC CTGATGTGGG TAGGCAAAGA TTGACAGATG CTTTGGGTAG GTTGCCTTCC
  AGTCTAGACA GGCATAAACA TAGCTGCCCA GGGGCTGCAG GATGGCTGAG AGGCGAAGCT
  GCCTGTGGGA ACTGTGGTTA TCGCCTGAAG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319794409	CHEV_1_74324731	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242366807					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:74317316 () rs orientation: forward

Symbol	Name	Function Class
Aamp	angio-associated migratory protein	1683 bp downstream
Gpbar1	G protein-coupled bile acid receptor 1	393 bp upstream
Rr17376	regulatory region 17376	1085 bp proximal
Tssr7370	transcription start site region 7370	1037 bp downstream