rs242411457 SNP Detail

Summary

• ID
  rs242411457
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:120087179 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTAACTAAC CAACTAACTA
  ACTAACTAAC TAAGAAGAGC AGCTTGTGCT TGTAACCACC AAGCCAACCA CTAACCACTC
  TTCAGCCCTC TTTTCTTCTC TTTAGTGGCT GAGACTCAAT CGTATGGATA CCCTGCACTT
  TACCAGTTTG TTTGCAAGCA TTGTCACCAG TCCAAATTCA TTTCTAAATT TAAAAACCAA
  M
  CAAACAAACA ATATTGATTT GCTTCTGTCA CAAGGCCTGG GATGAACCAT CCCTGGTGGT
  TCTAGCTATG TCCTGTGCAG TTGCGACCTT GGGGTCACTA CTTGTCCAGT GTCATGTTCA
  TTGTTGACTA GTTTTCTCAG ACTGACCAGC TAGCTTAGAA TAAAGACAAT GTTGCAGCGT
  CTTCCAAGAA ATCCTCATAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323226206	CHEV_9_120167231	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242411457					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:120087179 () rs orientation: forward

Symbol	Name	Function Class
Gm38642	predicted gene, 38642	1067 bp downstream
Gm47059	predicted gene, 47059	within coordinates
Rr207892	regulatory region 207892	1223 bp proximal