rs242421922 SNP Detail

Summary

• ID
  rs242421922
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:26317582 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    caggctggc ctcaaactca gaaatctgcc
  tgcctctgcc tcccgagtgc tggcattaaa ggcatgcgcc accacgcccg gctGCAGCAA
  GTGTTCTTAA GCATTGAGCC AGATATCCAC CATCTATTGC TACGAttgtt gctgttcaga
  Y
  aggatttctt atagcccaag ccgtcctcag actcatcatg tagataaact gatcttcctc
  ctgaatttcc catgtactgg cattacaagc aagggtcacc acaccaggtc tgtgccttgc
  tgaagttcaa acccagtgcc cgaacatgct                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325339824	CHEV_17_26235553	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242421922					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:26317582 () rs orientation: forward

Symbol	Name	Function Class
Gm8186	predicted gene 8186	383 bp downstream
Tssr146918	transcription start site region 146918	649 bp downstream