rs242448732 SNP Detail

Summary

• ID
  rs242448732
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:89529717 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAAGTCCAG GCAGAGGCCT AGGGAGGCTG
  TTGTCTGCAT CTGTGCGCAG TGGAGTTGAT GGCACTGTTG TGTCCCTAAA GTGGATGGGC
  CCTGTGGAGA TGTATGGTGT CCCTTGCTGA AACAGGTCTC CTGTGGGGCA AGAGCTGACC
  K
  TTGGGCTTCT CAAAAGGAGC ATGAAGGCAG CCCTGACCCC TGAAGCTCAT CCTCTGGCCT
  TCCTGTGTGC TTCCTCTGCT AGCACAAGCT ACAGTTGAGG TAGTTGAGGT GTCCTCATGA
  ATCTTGGAGC CCATGTGGGT AGCACAGTCC                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319834381	CHEV_1_91498570	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242448732					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:89529717 () rs orientation: forward

Symbol	Name	Function Class
Agap1	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	within coordinates
Rr35151	regulatory region 35151	within coordinates
Tssr8003	transcription start site region 8003	1229 bp upstream