rs242465793 SNP Detail

Summary

• ID
  rs242465793
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:25779172 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCATCTATA TTCACAGAAA
  ACCTCAAGGA CCTTTCAAAG AATTTGCAAA GAAAGATGGG CACAGAGCAC TGCATTTTTG
  TGATTTTAAT ATCACAGAAA AGACAAAATG CTCCAACCAA GAAAAAAGAC AAGTCCTGCT
  GTCATGTGAC TTTTCCTGGG GACATGAATA AATATCTATC TGTTCACTCC AGATGAGACA
  S
  TGATGACATA TTGATGCATG GATTCCACCC TCATCCAGCT TCACTGACCA ATGAGTTTAA
  TGGGCTGGCT TAGGAAAATA TGGGAGAGGG ATTACTGAGA GGGGCGTGGT TGATGGTAAA
  AGAGCTGTAT CACCACAAAG TGCTTCCCCA TTGTTGATAG ACGTCTATGG AAGACCCATC
  ATAGGTTCTG ACTTTCACTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324304518	CHEV_13_25687058	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242465793					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:25779172 () rs orientation: forward

Symbol	Name	Function Class
Rr275391	regulatory region 275391	within coordinates