rs242494655 SNP Detail

Summary

• ID
  rs242494655
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:116242036 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGGAGCCC ACACAAGCTC
  CTGAACGCAT CTACTAATGA GCTGAAGGGA AAGGCCCACA TTTGAGTTAA AGGTGTCACT
  TTGGTAGCGG CAGGAATTGA ACCCAGAGCT GTGTGCGTGC TAGGCAAGTG CCCCACCACT
  GAGCTATCGC CCCAGCCCTT GCACAGGTTT CTTTATTTTG TTATTAAAAT TTAATTTCGA
  Y
  ATGGAAGAAT GTGAATGAAT CCCCCAGCCC GCCGCCACCG TAAATTGTGT AGTTAAATTT
  CCCACATTTG TGGAAAATGC AGGGATCAGC CAGTAGATTT GGAATGCATT GGATGATAAG
  TCTTACTCTG GGAAAACCAC CTTCACTATC CTGCTATCTC CCCTGCCAGG AAAGTCTTTG
  TGTGTGTTTC TTTACTCCAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320895028	CHEV_3_116151305	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242494655					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:116242036 () rs orientation: forward

Symbol	Name	Function Class
Gm22361	predicted gene, 22361	4 bp downstream
Gm66091	predicted gene, 66091	within coordinates