rs242497186 SNP Detail

Summary

• ID
  rs242497186
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31060329 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTGATGTTC TCCATTGATG
  GTCATATTCT GGCTCCTCAT CTCTTTCTCC AAGTATCCAT TAAAATTACG ACCCTTGGGA
  GCAGAGAGAT GACTCAGTGG TTAAGAGCAC GTGCTGCTCT TGTAGAGGAC CCAGGTTCAG
  TTCGCAGCAC CCATGCCTGT GGCTCACAAC CACCTTTAAC TCCAGCTGCA GGGGATCTGA
  Y
  GCCCTCTTCT GGCCTCCTTG GGCAGGTGCA CTCATGTGTA CACACCCACC CATGTGCACA
  CATAATTAAG AACATCTAGA TATCTATTAT AATGTGTGAT CTATAGCATA AGCAAGGTCT
  GCAAGGGCAG AGCACATATG GTCAGAGTCC TGTCTCTTAC AATGGATCAT CTCTTCCCGT
  GCTTGCTTGC CTACAACCTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325357503	CHEV_17_30978300	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242497186					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31060329 () rs orientation: forward

Symbol	Name	Function Class
Dnah8	dynein, axonemal, heavy chain 8	within coordinates
Gm50252	predicted gene, 50252	within coordinates
Rr330577	regulatory region 330577	within coordinates
Rr334763	regulatory region 334763	within coordinates
Rr341194	regulatory region 341194	472 bp proximal
Rr341195	regulatory region 341195	872 bp proximal