rs242501387 SNP Detail

Summary

• ID
  rs242501387
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:60630297 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTGGACCA AGTCCTTATA
  CTTCCAATTC TATTGTTCTA CCAACCTGTT AGCCTCTTTT CCCATTAATG ATCAACTTTA
  TAAGATTGTA TTAGGCCAAC CTGGATAATC CAGGATCATT GCCTTATTTT AAGTTCTGCT
  GCTTATGAAT CAGAATTATA TCTCTAGTCT TAATTCTCCT CTGTCGTATA GAATGACATA
  Y
  TCAGATCCAG GGTCTCTTTA GAGCTGCATT ATTCTGCATG ATAAAACTAA TTCTTAGGTA
  AAGGGAAAGG CTAAGAACCA TCTTGTGATT TTTTTTCCAG TTTCTTTCAG AGGCATGTAG
  TGTATAATTT ACAGATGGAC ACCTACAATC CTTGAAATCC CCTTTTAAGT GATTCACAGA
  ATGAAATCGC CCTAGTCAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324986540	CHEV_15_60590003	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242501387					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:60630297 () rs orientation: forward

Symbol	Name	Function Class
Gm48947	predicted gene, 48947	1783 bp upstream
Rr303268	regulatory region 303268	1304 bp proximal
Rr313850	regulatory region 313850	1305 bp proximal