rs242507762 SNP Detail

Summary

• ID
  rs242507762
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97744692 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACAAAGACA TTCACGTCTA
  GGACATATAA CAACATTGAC CTTCAGTTGA ATGTTTGTTT TTAAATTACC CAATCAAGAA
  ATCACCTCCT TCTTGTGAGA AGTCTTGCTA GGTAATGCTA TTAAGACATT TAAAGTTTCC
  ACATGAAATC AGAGGCACAC GTTCCTGTAA CACATCTCTT CAATCTGTCC CTTCCCCTGT
  K
  TTCTGAAGGC CTGAAATGGC CTTCTCAGTC ACAATGGAGA GCTGTGGCCA TTACAGAGAG
  CTTTGAATGG TTGAAATGAT ATTTAGAACA ATATAATCCT TGACCCCAAA TCATGGACAG
  CTGTTCTTCT ATTTGAGGAT TTCAGAAACA CCCACTGGTC TCCTCAGAGG GCAAATTCCT
  AAAACAGCTC CTCTATGGAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323123516	CHEV_9_97763058	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242507762					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97744692 () rs orientation: forward

Symbol	Name	Function Class
Clstn2	calsyntenin 2	within coordinates
Rr198247	regulatory region 198247	1109 bp proximal
Rr205510	regulatory region 205510	1069 bp proximal