rs242583258 SNP Detail

Summary

• ID
  rs242583258
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:45627129 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCAAGAAAA GTTCTGCAGT
  ATGCTTTCAT TGGACATGAG CGTTTATATA CAGCTTTCAA TATGCCTTTT ATGGAATATA
  AAATAAAGGA GAATTGCTCT TATATAAATT GAGAGTTCTT ATTGATAATA ATATATCATG
  GTTGACAAAT GCCACATATG ATGGGAAAAA TTGTGTATGA AATATGGGGT GTGGCAGGGC
  R
  TATGGGAATT CCCTCTTCAT TGTTGTAAAA CAAAAGTACC CTAAAGAACA ATGCTTATTC
  ATTAAAAAAC ATAATTTTTA AAAAGTGGTT ACTTTGATAT TACATAATTC TTTCAACATT
  TCAATATTTT GGAGGTTTCC AATTTGTTCG ATTTTTCCTA TACAAGAGAA TATATCTAAA
  TTTCTCTCTT TTTTTTTCTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320276510	CHEV_2_45592637	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242583258					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:45627129 () rs orientation: forward

Symbol	Name	Function Class
Gm13465	predicted gene 13465	within coordinates
Rr556487	regulatory region 556487	514 bp distal