rs242665092 SNP Detail

Summary

• ID
  rs242665092
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:97148804 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTGCTATT AACAGAGGAA
  TACAGCAGCG ATGGCAGCAG TGGGGTAGAT GACCTTGCCA GTGAGAGCAA GGGCCAGCAG
  GCAAAAAGCA AAGTTTTCAT CAGTGCTGCC ATAGGGGGGT GGGGATGGGG GTGGGGGTGG
  GGGCTGTCCA CATCCAGGCT GGGTCTTCTC ATCTCAGATA ACCTGATTGA GAAGGTCCCT
  Y
  ACGGGTTTGC CCAGCGTGCT TTGCCTTTTA GGTGATTCCA GATCCAGTTC GTATGACAAG
  CAAGATTAAC CATAACAAAT AGTCGCTTTG GCTAATACTA ACATTCAGTA GGGCTTCCTC
  GCCTGTGTGG GGTTTTCATG TTCTCTATTT CTTTTGAATC TAGCAAGTTT TCTGTGATCT
  ACTAGAATGA ATCAATCCCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325076427	CHEV_15_97081354	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242665092					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:97148804 () rs orientation: forward

Symbol	Name	Function Class
Gm57814	predicted gene, 57814	1761 bp upstream
Pced1b	PC-esterase domain containing 1B	within coordinates
Rr305670	regulatory region 305670	1404 bp distal
Rr308785	regulatory region 308785	1004 bp distal
Rr308786	regulatory region 308786	597 bp proximal