rs242737195 SNP Detail

Summary

• ID
  rs242737195
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr17:26839009 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGCATAATG CCCTTGACCT TCACACTGGT
  TTGCCATGGA TTAGGGGCCC TAATATTTTA TCTCATTAAA TGTTGGTGTT GATAATAAAG
  ATCATGGCTA GAGGCTGAGC ATTCAACCTG TAATGAGACT GTGCTCAAGA CTCTGGTTCT
  Y
  ATTGGCCACC TCAGCAGCCT CATTCTTGAT GTATACAGAG TCATTGGGGG TTGCTGGGac
  atagagagca tgacattctc atgccaccag cgcacctcct ttacctgttt cagatccccc
  agataactta tgctaccctg tgtacgtacc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325342563	CHEV_17_26756980	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242737195					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:26839009 () rs orientation: forward

Symbol	Name	Function Class
Ergic1	endoplasmic reticulum-golgi intermediate compartment 1	Intron
Gm17218	predicted gene 17218	323 bp downstream
Rr523901	regulatory region 523901	1048 bp distal
Rr523902	regulatory region 523902	394 bp proximal
Rr523903	regulatory region 523903	924 bp proximal
Rr523904	regulatory region 523904	1425 bp proximal
Tssr143257	transcription start site region 143257	1477 bp upstream