rs242754926 SNP Detail

Summary

• ID
  rs242754926
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:20988601 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tgcacagac tgccctcgag acgacacgag
  tgtagccagc tttgagcttc tgctccttct gcctctggct cctaagtagc tgggaatgta
  agcctgcacc agcaaacctg gtGATGGATT TCAGTCTAGA CTTCAAGTCT GTAAGTAAGA
  M
  GTTAGCCATG CTAATAACAA AAGTAGGTAT GCCAGACATT TGTTTGTGGT GCTGTCGAGG
  ACAGATAGGC AGATAAAGGG AAGTCATGGT TAAAAAGCTA GGACCCATAA TGGTCTCACA
  ACATGTCAGG ACTTCCCATG GCACACCATA                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319654653	CHEV_1_20908458	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242754926					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:20988601 () rs orientation: forward

Symbol	Name	Function Class
Paqr8	progestin and adipoQ receptor family member VIII	within coordinates
Rr407023	regulatory region 407023	1581 bp proximal
Tssr6058	transcription start site region 6058	523 bp downstream
Tssr6059	transcription start site region 6059	518 bp downstream