rs242759129 SNP Detail

Summary

• ID
  rs242759129
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:110189662 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAATGACCC AGGTCTAAGA
  AGTTTTGAAT GATTTATGAG GCTAGCTGTA TTGGTTAAAA ACAAGTGATT TGTTTCTAAT
  ATACATACAT ACACACCCAC CCACCCCATA TATATATATA TATATATATA TATATATATA
  TATATATATA TATGCACATA TATATATATA TACATATATA CACACACACA CACACACACA
  T
  ATATATATAT ATATATACAC ACACATATAC ATATACATAT GTATATATAC ACACACATAC
  ATATGTGTGT GTGTATACAT TGTGGACTGT GAATATCAGT TATAGATAGC TTCTTCTATA
  GGATTGAACT CAGTGCTCTC TTTCCCCTTG ATAGGACCCT GTCTGGCTTG AACCACCTCC
  ACTCTGCCTT TGTAGTGTGC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CE/J	CZECHII/EiJ	JF1/MsJ	MOLF/EiJ	PL/J	PWK/PhJ	SJL/J	SPRET/EiJ
ss355239420	MGP_WTSI_2_110199474	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CE/J	CZECHII/EiJ	JF1/MsJ	MOLF/EiJ	PL/J	PWK/PhJ	SJL/J	SPRET/EiJ
rs242759129					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss355239420	MGP_WTSI_2_110199474	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:110189662 () rs orientation: forward

Symbol	Name	Function Class
Fibin	fin bud initiation factor homolog (zebrafish)	1608 bp downstream
Gm30319	predicted gene, 30319	within coordinates