rs242774108 SNP Detail

Summary

• ID
  rs242774108
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:99142277 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCTTCTTC CCCACCCTTT
  TTTTAACAAA CTTTTTTTTA TCAAACTTGA GTCTCTACTT CCAAAAGGTT CTTCTTGGGC
  TTTTTCTTTA TGTCAATCTC TTGGGTGCAT CCATCATCTT TGGTGTCATT TCTGTTGATA
  AAAACCATAT CCATTTCCTA TAGTGAACTG ATTTAGGATC CTAGTGCCTC TCTTGTCCCC
  Y
  GCTGCTGCAT GTGTAGTTAC CTATGGAGCC TAGCTTGGTG TCTGGGGGTG TGGAGGAAGG
  GTGGCTGCTG AGTCTCTGTT TTGCTGTTCA TTTTTGAGTT GATGGTGATT GGGTAGGCTC
  TGGCAGCTGT GGTTCCTCTG GGGGTTGACG AGCAGTGATG GTCGGGAGAC TGGAGGCTAG
  GTGTGGCTGC TTAGACATCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323135186	CHEV_9_99160643	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242774108					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:99142277 () rs orientation: forward

Symbol	Name	Function Class
Cep70	centrosomal protein 70	within coordinates
Gm18914	predicted gene, 18914	721 bp downstream
Gm47199	predicted gene, 47199	17 bp upstream