rs242816923 SNP Detail

Summary

• ID
  rs242816923
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:104730581 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AATGATACA CACATTTGTT TTCTGTCTTT
  CTCAGAGCTG TAGCAGGACA GCCTCCACTG CAGGGCTCCG TAAGGTCAGG TCCCACCTAG
  CACACACAGT GTCTTCCTGG GAGTCCCAGC TTTCTGCTTT GAGTAAGAAT TGTCTCCTAC
  M
  TTGGACTCTG CTGAGATGGA TTGCTAGGTA TCATGGTGAA GATGACTCTG TAGAGCCTCA
  TCCAGACCCA AAATCCATCA CAAACACTCA TTAAGCTTTC CTTGAGTAAA TACATGGGCA
  TTAATACAAC TTGCCAGTTG GAAATTTGCA                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323170392	CHEV_9_104755712	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242816923					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:104730581 () rs orientation: forward

Symbol	Name	Function Class
Cpne4	copine IV	within coordinates
Rr198572	regulatory region 198572	within coordinates
Tssr86829	transcription start site region 86829	1075 bp upstream