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rs242843959 SNP Detail
Summary
  • ID
    rs242843959
  • Variation Type
    SNP
  • Alleles
    C/G
Genome Location and Flanking Sequence
  • Location
    Chr12:97954533 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                TAGATGGAAC TTCAGATTGG
    AGAAGCTAAA ATGGATCTCA CTCGAGAGGA GGCACCAGAG CGAAGGCTTT GTAGATAAGA
    GGAATCAGGC TAAGGACAGT GATGAAGAGA GACCATTTCA GGCAAGAAAA ACAGGAGCTG
    AGCCCTCCTC CCACTCCAGG AATGACAAGA TGCTCTACTG ATTGGAGAGA GGGCTGAGGA
    S
    AGAGTAGTAG TAGATTATAG AATCAAAGAC ATAAACACAG ATGTATTCGA GGGGAGAAAG
    GGAGGCAAGC AGCACATGCA CACATGCACA TGCATGCACA CACATGTACA CAAACTTCTC
    TGACCTTGTC TGTGGATCTC CATCCCCAAC ACCCCCTGCC TGGGGAAGGT CGAGTAGTCC
    TTGGCAAGCC TCTAAGTTCA                                            
    
    S = C/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss324132350 CHEV_12_99226484 CHEVERUD SCREENING_POP f SNP G C
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs242843959 SNP G C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr12:97954533 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr387674 regulatory region 387674 within coordinates

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
07/22/2025
MGI 6.24
The Jackson Laboratory