rs242854720 SNP Detail

Summary

• ID
  rs242854720
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:62373768 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCTCGGCA AAAGATTCTA
  GCTTATGTCA CAGTAACAAA AAAGTAACCA GGAGAGTAAA TAGTGAGCTC ATTGAAAAGT
  CTTCCTCAAA AGAAGAGAAG AGGCTAGAGA CGGCTCAGCA GTTGAGGGCT TGCCGCTCTT
  GCAGAGGCCC TGGATTAAGG GCACACACAG CAGTTTACAG CTGTCTGTAA CTCCAGGTCC
  S
  GGGGACCCTA TGGTCTTGTC TAGCTAAGGA GAGCATTAGA CACACATCTG GTGCACTTAG
  ATACAATAAA ACTAAATTTT TAAGTGTTAA AAATAGTGAT AAATTATTGC CGGGCGTGGT
  GGCGCACACC TTTAATCCCA GCACTCGGGA GGCAGAGGCA GGCGGATCTC TGAGTTCGAG
  GCCAACCTGG TCTACAAAGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323703875	CHEV_11_62296444	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242854720					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:62373768 () rs orientation: forward

Symbol	Name	Function Class
Gm12278	predicted gene 12278	within coordinates
Pigl	phosphatidylinositol glycan anchor biosynthesis, class L	within coordinates