rs242862989 SNP Detail

Summary

• ID
  rs242862989
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:121395669 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACAACATTA TGAACTAACC
  AGTACCCCGG TGCTCGTGTC TCTAGCTGCA TATGTATCAA AAGATGGCCT AGTTGGCCAT
  CAGTGGAAAG AGAGGCCCAT TGGACACGCA AACTTTATAT GCCCCAATAC AGGGGAACGC
  CAGGGCCATT AAAAAAAATA ATAATAATGC AACCAAGTCA AGCTGGGATC TGGCCGCCTG
  Y
  AGCGGTGGAG GGATGCGGGC CTGGACCCTG GCTTACTGAG TCAGGGCGAA GGATGCTTTT
  CAGATTGTGA TCTGTTACTT ACACCAGCCA CCGTACCCCC TTTCGCATTA ATTCTTGATA
  GAGCAGCAGG GTACTGGCAG TTCTGCAGGC GTAGCACACA ACCCCCGTCA CTGCCTAGTG
  AGAGACAACG TTAGGACAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323513376	CHEV_10_120996820	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242862989					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:121395669 () rs orientation: forward

Symbol	Name	Function Class
Gm68077	predicted gene, 68077	602 bp upstream
Tbk1	TANK-binding kinase 1	within coordinates