rs242865037 SNP Detail

Summary

• ID
  rs242865037
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:115709618 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCCA GCCCCTTCCT GTTTTATACA
  S
  TACAGTGCTC TCGCTCCTGA CCAGC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321916491	CHEV_6_115682675	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242865037					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:115709618 () rs orientation: forward

Symbol	Name	Function Class
Rr132360	regulatory region 132360	18 bp distal
Rr147096	regulatory region 147096	within coordinates
Tmem40	transmembrane protein 40	within coordinates
Tssr58323	transcription start site region 58323	681 bp downstream
Tssr62527	transcription start site region 62527	1567 bp upstream
Tssr62528	transcription start site region 62528	1542 bp upstream