rs242882017 SNP Detail

Summary

• ID
  rs242882017
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:31051206 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGCAGTCG GCACTCTTAA
  CCACTGAGCC ATCTCGCCAG CCCCCCAGGG CATTCTTTTC TGCCTCCAGG GGAATACATG
  TATGCAAATA GATAGACAGA CACAGTAAAT AATAGAAATA AACCTTAAAA AGTCTGTTAA
  AAGCCGGGCG TGGTGGCGCA CACCTTTATT CCCAGTACTG GGGGCGGGGG TGGGGGGGGG
  K
  GGGGGGTGGT GGCAGAGGCA GGTGGATTTC TGAGTTCTAG GCCAGCCTGG TTTACAAAGT
  GAGTTCCAGG ACAGCCAGGG CTATACAGAG AAACCCTGTC TCGAACCCCC CTCCCCCCCC
  CAAAAAAGAA ATGGCTGTAT GCTCCTGGTG TGTGTGTGGG TGTGTGTGAA AAAGAAATGG
  CTGTATGCTC CTGGTGTGTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CZECHII/EiJ	JF1/MsJ	MA/MyJ	PWK/PhJ
ss353531890	MGP_WTSI_2_31016714	EVA_MGPV3	EVA_MGPV3	f	SNP	T	G	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CZECHII/EiJ	JF1/MsJ	MA/MyJ	PWK/PhJ
rs242882017					SNP	T	G	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss353531890	MGP_WTSI_2_31016714	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:31051206 () rs orientation: forward

Symbol	Name	Function Class
Gpr107	G protein-coupled receptor 107	within coordinates
Rr372995	regulatory region 372995	367 bp upstream
Rr554554	regulatory region 554554	246 bp distal