rs242884190 SNP Detail

Summary

• ID
  rs242884190
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119800098 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCTGCCTG AGCAGCCTGT
  CACCAGGCCA GGCCTCCACT AGGCTAGGCT GCCCTCCCTG GGCCTGAGCA GACAGCTCTG
  CCTCCTTACA ACTCCAGATG GCATCATGGA GGAATGGGTT AATTCAGAGG GGAAAAAAAA
  AAAACTGTTC CACTTGCCCA GCCAACCTCA GCTGGCTCTC TGCCTACAGC CTGACTGGCC
  S
  GCCTGGAAGA AAGCCCAACA TGCTGTCCTC CTGCCTCAGT ACAGCTTCTG TCCATGCTAC
  ATGATAGTGC CCCACCCCAC ATGCTTCCTG GGGGTACCCC ACACTCCCCA CCTCACCAAG
  AAGACCACAC TTAAAAATAG AGCATCTTTA TTGGTACCTG TCAGCTCAGG TACAGTGTGT
  TCCCACAAGC ACACAGGCTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323223762	CHEV_9_119880150	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242884190					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119800098 () rs orientation: forward

Symbol	Name	Function Class
Csrnp1	cysteine-serine-rich nuclear protein 1	131 bp downstream
Rr688588	regulatory region 688588	within coordinates
Rr688589	regulatory region 688589	93 bp distal