rs242955705 SNP Detail

Summary

• ID
  rs242955705
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:152665677 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAAGGGgtc tggaaatcag aggataacct
  agaatgtcga tcctaacttt ccaccttgtt tgaggcagag tctcttgctt gtggctttgc
  ctgccaggct agctggcctg caaacttcca gggattctcc tgggattaca gacaagtcct
  R
  ccaccacatc cagctgttta catggcttct ttctttcttt tttctttttc ttttttgttt
  ttttgttttg ttttgttttt cgagacaggg tttctctgtg tatccctgga tgtcctggaa
  ctcactttgt agaccaggct ggcctcgaac                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320068146	CHEV_1_154637056	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242955705					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:152665677 () rs orientation: forward

Symbol	Name	Function Class
Rr420541	regulatory region 420541	307 bp proximal
Rr420542	regulatory region 420542	410 bp proximal
Rr420543	regulatory region 420543	534 bp proximal
Tssr9422	transcription start site region 9422	1969 bp upstream