rs243015628 SNP Detail

Summary

• ID
  rs243015628
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:61209777 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACGAAGCTA AGGAATTTGC
  CCCACGTGTA GTTTTTTGTT TTTTTTCAAT TGCCCTGTGA GGACAGAAGA GCCCATGAGG
  CTCTGGAGCA TCGAGATGCT TCCCGTGCCA GTAAAAATAA AAGCCAGTCA GTCAACAGGT
  GGTGATGGAG TCAGAGGCAG GTGATGAGTT CGAGGCCAGC CTAGTCTGCA GACTGTGCTC
  Y
  AGGACAGCCA GGGCTCAGCA GAGAAACCCT GTCTTGAAAA AAAGAAAAAA GAAAGAAAAG
  AAAAGAAAAG AAAAGAAAAG AAAAGAAAAG AGAAAAAAGA AAAGAGAAAA AAGAAAAGAA
  GAAAAGGAAA AGAAAAGAAA AGAAAGGAAA GGGAGGGGAG GGGAGAGGGG AGGGGAGGGG
  AGAGGGGAGG GGAGGGGAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322978673	CHEV_9_61150302	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243015628					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:61209777 () rs orientation: forward

Symbol	Name	Function Class
Rr204421	regulatory region 204421	1683 bp distal
Rr204422	regulatory region 204422	322 bp proximal
Rr209972	regulatory region 209972	1977 bp distal