rs243044891 SNP Detail

Summary

• ID
  rs243044891
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:84068332 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATCTTTAAA GACCCTATCT
  CTATCCCTGC TCCCCCACAC ATCTTGAGGT ACTGTAGAAT AGGACTTCAG CATTGGGTTT
  TGGGGATATA ATTCAGTCCA GAAAAGACTT CTAGTTCCAG CTTCTAGAAT GCACACTTGC
  CCCCTTTCTC TTCTACCTGC TAGCCTTGTA TAGTATGTTT TCTCCACCCT TTGTTTGGCT
  Y
  TATTCCTCCA CCTCTTACAG ACACACAGCT TGTGTGGCAA GGACTCATGG AGACCTGCTC
  TACAAAGCCT ACAGTAGAAT GGGCAGGTCT TGGCCTGTCC CAAACAGCAC AACACTCAGG
  AGTGGTTCCA GTTCCAGAAG TTACTTACTG TCTTACAGCC CTTTGCCATT TCTCTGCTCC
  GGTGTCTAAG CATTTGATAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323769354	CHEV_11_83991008	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243044891					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:84068332 () rs orientation: forward

Symbol	Name	Function Class
Acaca	acetyl-Coenzyme A carboxylase alpha	within coordinates
Cpgi3430	CpG island 3430	1668 bp proximal
Rr453130	regulatory region 453130	1362 bp proximal
Rr453131	regulatory region 453131	1923 bp proximal
Tssr103797	transcription start site region 103797	124 bp upstream