rs243061842 SNP Detail

Summary

• ID
  rs243061842
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:99139735 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATCTTCCT GAGATGGGTT
  CACCTTGTAT TAAAGTCTAC AATAGTCTGC AAGGCCCAGA ATAAATTCAT TTTATGAAAG
  ACTCCTGCTA CTTATATGCT TATCCTGTTA TTATAAATAA CAATTCCCTA CGTATTAGCC
  TACCCTTTTG AGCAGATCTC TGTAGAACAA TGAAGATATA CTGCCTTGTA TATATGCTAT
  R
  TAGACAAATA GACTATTTCT TAATCCTTAA TATGATCCTA TAAGAATTCC TAAAATTATA
  GTAATTATTA AGCACTTTTA TAATAACACT GCTATTAAAT CCTTCCTAAT AGTCAAAACT
  GCAGTGAGAA CTCTACCAGT CTTTAGTGTC ACCAGTTCAT TGCTTCTGAG ATGGCTAGCA
  GGCATCTACT ACTCAGTCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323135166	CHEV_9_99158101	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243061842					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:99139735 () rs orientation: forward

Symbol	Name	Function Class
Cep70	centrosomal protein 70	within coordinates
Gm47199	predicted gene, 47199	1793 bp downstream
Rr383815	regulatory region 383815	within coordinates
Rr685374	regulatory region 685374	368 bp distal