rs243106721 SNP Detail

Summary

• ID
  rs243106721
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:128532454 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gcttatagg catgcgctcc atttatatag
  gacggtgaag gtggaacacc agggtttctt gcatgacagc agagcatcta actgagctac
  atccccagac ctttctccct tttctttttt tctattcatt ttcttttATC Cccccccctc
  Y
  ctctctcctt ccctcctcct ctcccttcct TTCTTTCTAT CCCACTTTGA GTGCTGACAT
  GTGTGCGGTT CTGCTATGTG CCAAGAAAAT TTCTAGATGC ACAAAACATA GTCTTTAGTC
  TCAAGACCCC AGCCCAGCAA GAGGAGAACA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319965278	CHEV_1_130501294	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243106721					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:128532454 () rs orientation: forward

Symbol	Name	Function Class
Rr366987	regulatory region 366987	1159 bp upstream
Rr396265	regulatory region 396265	1296 bp upstream
Rr417789	regulatory region 417789	1377 bp distal
Rr417790	regulatory region 417790	1072 bp proximal