rs243148270 SNP Detail

Summary

• ID
  rs243148270
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:11350330 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATTG CATCCTGATG TCCTGAGCCC
  R
  AACTTCTTTT CCATGGTCAT GTGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325721057	CHEV_19_11447456	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243148270					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:11350330 () rs orientation: forward

Symbol	Name	Function Class
Ms4ac	membrane-spanning 4-domains, subfamily A cluster	within coordinates
Rr544325	regulatory region 544325	1513 bp distal
Tssr155162	transcription start site region 155162	426 bp downstream
Tssr155163	transcription start site region 155163	410 bp downstream
Tssr155164	transcription start site region 155164	379 bp downstream
Tssr155165	transcription start site region 155165	294 bp downstream
Tssr155166	transcription start site region 155166	253 bp downstream
Tssr158339	transcription start site region 158339	705 bp upstream
Tssr158340	transcription start site region 158340	593 bp upstream
Tssr158341	transcription start site region 158341	576 bp upstream
Tssr158342	transcription start site region 158342	17 bp upstream