rs243201093 SNP Detail

Summary

• ID
  rs243201093
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr13:24241394 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGGAGAGG GGAGAGGGGG
  AGAGGGGGAG AGGGGGAGAG GGGGAGAGGG GGAGAGAGAG AGAGAGAGAG AGAGAATGAG
  TGTGTGTGTG TGTGTGTTTG TGTGTGTGTG CGTGTGTGTG TGTGTAGAAC AGTTAAACTC
  CAGTGGTACC AAGCAGGGGA ACCTCAGGCT TGGTGAGTGG AGATTCTGGG GGATTCTATA
  R
  GCACCAACTA GTCTTACCAC AAGGCTTAAA TCCCATGGGT CTCAAGCTTT TCTGAGGTCA
  AGACCTCAAT TTTCTTCATT CTAACTCTTT ATCTTCAAAC AGTGCTTTGG GCAAACATGC
  CTTACCACCT AAACTTGGAA AACCTGGTCT GTTCTAGAAA CCAGAATATT TGCTATGCTT
  TGCTGTTTGT GTCTGTGGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324294184	CHEV_13_24149280	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243201093					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:24241394 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Carmil1	capping protein regulator and myosin 1 linker 1			Intron
				Noncoding-Transcript-Variant
D13Ertd224e	DNA segment, Chr 13, ERATO Doi 224, expressed			488 bp proximal
Tssr121764	transcription start site region 121764			1878 bp downstream
Tssr121765	transcription start site region 121765			1909 bp downstream