rs243229806 SNP Detail

Summary

• ID
  rs243229806
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:39370443 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTAATTCCA TACTTAAATA
  TTAGACAGAA TCCCAGGTAA ACAAACGGCC CATTGTGTTA CAAAGTATTT GATTGAGGCT
  CTTGAGTCTG TTGGGAATTG CACCCCTGCC ACTACTGAGA GAGACAAAGG TGGTGCTTTT
  AATATTGGAA TGCATGCTGG GCTTTGACAC TTGCACTTCT TTGGAACAAA GGAGATCTCC
  Y
  TCAGTGTAGG GAGACCAAGT GTAGGAGACC CACCAAGGAG ACAGAGCTGT GACAGGATGT
  AGGGGGCGGG GTTACTCATC CAGTGAGGAT AGAGAGGGAA TGCAGAAAAC GGTTCAAAAC
  ACAGGCCTGG TTAAACCTCA TGGGCATAGG AGTATACTGC CTTCCCAGAG TGAGGGGAAG
  TCACAGCAGG TAATTGTGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320228535	CHEV_2_39335951	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243229806					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:39370443 () rs orientation: forward

Symbol	Name	Function Class
D2Mit368	DNA segment, Chr 2, Massachusetts Institute of Technology 368	1155 bp proximal
Rr373076	regulatory region 373076	445 bp downstream