rs243255310 SNP Detail

Summary

• ID
  rs243255310
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:156958594 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTGTTCTGG ATTCTAGGTC CTGCTCAGGT GAAGTCCCAC
  CACATGCTAA CTATCCAGTT TCCAACAACA TTGTTACAGC TTTTAAGTTA GTCAATATTT
  W
  ACTTGTCTAC AAAAAATTTT CATTTGGTTG GCTGTTTTTT TGAGACAGAG TCTCACTATG
  TAGCTCTGGT TGGCCAGGAA CTTGCTATAT AGACAAGGC                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320584272	CHEV_2_156942410	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243255310					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156958594 () rs orientation: forward

Symbol	Name	Function Class
Rr568435	regulatory region 568435	1714 bp distal
Rr568436	regulatory region 568436	280 bp proximal
Rr568437	regulatory region 568437	453 bp proximal
Rr568438	regulatory region 568438	854 bp proximal
Samhd1	SAM domain and HD domain, 1	Intron