rs243261952 SNP Detail

Summary

• ID
  rs243261952
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136347696 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCAAAAATG GCAAGTTTTA
  TAAACCCAGA AACTAAAAGA CAGTTCTGAG AAGGGAGTTA CCTGCTTCCT GAGAGGAGCG
  GCCCAGGAAA GGAGGTAATT ACAGTGACTG TGTTTGTTGG GCGCTGTTGG CATGCAGTGG
  CCCGTGTGCT CTCCCTGCGA TCACGCTCCT ATTCAGTCTT CACTCCCACA CCACTAGGGT
  R
  GAGTCTTCAT TCACGCACGT ACACATGAGG TCTGAGAAAT ACAGAATCTC TGATCAAAGC
  CACACGTAGC AAGGATCAGG GCTGAGGTTT GGACTCTGCA GTCTGATCCA ACATCCCTAC
  AGTGGGTGAG GCCTAAACTC ACCGGCCAAA GCCACTTAGA ATTCCCCAAA GAGCAAGAGA
  CAGCTTGGGG CTGGAAAGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321356424	CHEV_4_136176300	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243261952					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136347696 () rs orientation: forward

Symbol	Name	Function Class
Rr398615	regulatory region 398615	940 bp upstream
Rr602387	regulatory region 602387	952 bp proximal
Rr602388	regulatory region 602388	1114 bp proximal