rs243335802 SNP Detail

Summary

• ID
  rs243335802
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:39008919 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCTAATAC CTCGCCAAGG
  TCCTCAGGCA TTTGTGGACC AGAAGAAAAG TGCCAAACTT GCTTCTGCCC CTCTAACAAT
  GTTTTTTTCC CATCTTCACA CAACTGGAAG AGCAACTAAT GTTGAACATC AGTTTGCCTC
  CAGGCTGTTT CAGAGTGACA TTTGGAGGCA AGAAAGAAAA TTGTGTTGTG CTAACTCTGT
  K
  GGGCTCTGAA GATTGATTGT TTTCTGTTCT GTATTAAAAC TCCCAAGGTC AAGACCCAAA
  ATTTTCTCCT TTATACTTGA ACCTAACAAA AGAATTACCC ATCTTAAAAA AAAATGATGG
  AAAAACAAAC AAACAAACCC ATCTAACAGT CAACTTGAAA AAAAAGTTAA TATCACTATG
  TTCTCTAGTG AGAGTTTTAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322911105	CHEV_9_38905208	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243335802					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:39008919 () rs orientation: forward

Symbol	Name	Function Class
Gm47085	predicted gene, 47085	8 bp downstream