rs243342296 SNP Detail

Summary

• ID
  rs243342296
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13253548 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGACCCAAG AAGAGTGGAT
  GAGGCATTGC TGTGGATGAA TAAAGATGGC AACAGCTGAA CCCACTGACA TGTCTGCAGT
  ACCAACTACC TAGGTGACCA GCCAGACTGC ATCAGCTCCC TGGTTCCCAT CCCCTTCCAG
  TCCCCATCTT AACTGCTTTT CTATTGCTGT GAAGAGACAC CATGACCAAG GTAACTTATA
  R
  AAGAAAGAGT TTATTGGTGC TTATAAGTTC AGAGGACTAG AGTCTATACC ATCATGGTGG
  GGAGCATGTC TGAAAGCTGG CAGGCATGGC ACTGGAGCAG TAGCCGAGAG TTCACATCTC
  ACCCACAAGT GGGAGGCAGA GAGCTAGCCA GAAATGGCCT GGGCTTGGGC TGGAGAAATG
  GCTTAGTGGT GAAGAGCACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505075	CHEV_8_13203548	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243342296					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13253548 () rs orientation: forward

Symbol	Name	Function Class
2810030D12Rik	RIKEN cDNA 2810030D12 gene	1758 bp downstream
Gm56825	predicted gene, 56825	1315 bp upstream
Rr659875	regulatory region 659875	1835 bp distal
Rr659876	regulatory region 659876	1326 bp distal
Rr659877	regulatory region 659877	825 bp distal
Rr659878	regulatory region 659878	176 bp proximal
Rr659879	regulatory region 659879	267 bp proximal
Rr659880	regulatory region 659880	421 bp proximal