rs243373187 SNP Detail

Summary

• ID
  rs243373187
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13440777 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGGCTTGC ACCTTTAATC
  CCAGCACTTG GGAGGCAGAG GCAGGCAGAT CTCTGTTTGG GGCCCAGCCT GATTTACATA
  GAGTTTCGGG ATATCCAGGG CTACATAAAG ATATTCTGTC TCAATGGGAA AAAAATAAAA
  GGGTTTTCAT TGGGGACTGG GGAAATGGCT TAACGTTTAA GATCACTGGC TGCTCTTCCA
  R
  AGGACCCTGA TTAGATCCCC AGCAGCCACA TATCAACTCA CAACCAGCTG TAACTCAAGT
  TCTGGGGCAT CTGATGCCCT CTTCTGGCCT CTGCAGGGAC TTGGCACACA GGTGGTGCAC
  ATGCAGGCAA AACAGCTGTA CTGGCTAGTT TTGTGTCAAC TTGACACAGC TGGAGTTATC
  ACAGAGAAAG GAGCTTCAGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322506511	CHEV_8_13390777	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243373187					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13440777 () rs orientation: forward

Symbol	Name	Function Class
Atp4b	ATPase, H+/K+ exchanging, beta polypeptide	within coordinates
Gm45410	predicted gene 45410	329 bp upstream
Rr659923	regulatory region 659923	71 bp proximal
Tssr80441	transcription start site region 80441	1962 bp upstream
Tssr80442	transcription start site region 80442	1075 bp upstream
Tssr80443	transcription start site region 80443	911 bp upstream
Tssr80444	transcription start site region 80444	674 bp upstream